Others may disagree with me here, but as far as the actual mufflers you have on, for performance I don't think there's really much difference in them when you're looking at the flowmaster/corsa/magnaflow/etc. I think they're all an improvement over the stock mufflers and it's more a matter of figuring out which one puts out the sound that you like best. I also believe you'll get a slight performance improvement with any of them, but to get the most out of your exhaust you'll need to think about the whole system. Long tube headers will be a good upgrade along with high flow cats, new pipes all the way back (I'd reccomend 2 1/2" pipe) and get rid of the resonator if it's still there.
I also think that there could be a dozen different replies to this, all slightly different, and all still pretty much be correct...because I feel like this is as much just finding the sounds that you're happy with and personal preference as much as anything.
If you like the flowmasters, then stick with'em, that's what I run on mine and love them.