I agree, sounds like you are on the right track. By black & red wires, do you mean the thick battery terminal cables? The red battery cable goes to the starter solenoid. There are then multiple positive power wires from the starter solenoid... two of those are feed wires to the car's electrical system; one goes to the firewall connector furthest from the fender, and the second to the horn relay, and both then branch to many places.
The diagram I was looking at for my prior posting is for my '63.
It may not be the same as for your '65, and it's certainly possible the wire colors are different.
Here are links to the two halves of an electrical diagram for a '65:
http://www.oldcarmanualproject.com/...ng diagrams/Chevrolet/MWireChev64_3WD-106.jpg
http://www.oldcarmanualproject.com/...ng diagrams/Chevrolet/MWireChev65_3WD-107.jpg
You may find it best to print the diagrams and use different-colored highlighting magic markers to trace circuits to identify the wire colors and connectors. If you don't have the computer skills to create jpg files from them and blow them up to a usable size, email me and I'll send you enlarged copies.
First thing I would check is whether the headlights work in either low or high beam. Also, I think there is a "headlights on"
indicator light somewhere on the instrument panel, as well as a "high beams on" indicator light. If the indicator lights work but the headlights don't, then power is getting to the hi/lo-beam switch but power is not getting through the firewall connector (the one closest to the fender) to the headlights via a tan wire (low beams) or a black w/lt green stripe wire (high beams). If the indicator lights aren't working either, then the problem may be in the fuseblock on the firewall.
It appears to me that power is supplied to the hi/lo beam selector switch via a black wire with a light blue tracer, so with the headlight switch on, I'd look to see if power is getting through that Blk-Lt Blue wire to its connector (receptacle) at the hi/lo beam switch. If so, then jumper that connector to one of the other connector receptacles and see if that powers the high or low beams at the headlights, then try jumpering to the second connector and check again; if either (or neither) works (lights the hi beams or the low beams), it's then a matter of finding out where the path(s) to the headlight connector is broken (tan wire (low beams) and/or a black w/lt green stripe wire (high beams)).
I used the '65 diagrams for the 2 paragraphs above... I'll try to take a closer look at the '65 diagrams when I have some time. But, it sounds as though you are finding and correcting some pertinent problems.
Good luck, following the wiring and checking continuity through those firewall connectors looks like a daunting task.